After the recovery of the realms Raiden Sonya Johnny and Kenshi (who suddenly appears) learn that Quan chi and shinnok are about to attack With the fallen heroes from the first game And a resurrected Noob. (Scorpion and Skarlet are Quan Chi's personal enforcers)
Raiden warns Bo Rai Cho. and Bo Rai Cho travels to Outworld To recruit allies, but with no luck he only recruits Li Mei.
Quan chi and shinnok make a deal with Reiko (Who was left in charge of outworld Under shao kahn’s secret wishes) to join them in the attack to conquer earth realm and that Reiko can enslave any warrior who falls in battle. But plan to betray him in the end to take control over outworld as well.
Quan chi then calls upon his spy Tanya to become shinnok’s body guard incase the heroes try to attack him.
Later on a bunch of stuff goes on to explain the new character’s (MK4-MKD) storyline. along with a few recruitment meetings and battles.
The war is close to breaking lose, and both Shinnok and Quan Chi realize their army was weakened because sektor had killed cyrax after he deflected to earth realm, and that sheeva was slain in one of the earlier battles. Kitana, Jade, Kung Lao, Sub-zero, smoke, jax kabal and nightwolf were slain by Ashrah as payment to Raiden after he cleansed her soul so that they can join the forces of light (Liu Kang, Sindel, and Stryker aren't because for reason's that get explained in MK11). Quan Chi then pays Havik to forge an army between the chaos realm and the nether realm.
Finally the invasion breaks lose. Goro dies in battle as well as kabal (AGAIN) and ermac finds out he’s king Jerrod and joins earth realm to fight along kitana. Towards the end when it looks like the good guys won, Quan Chi kills Reiko, and takes Baraka, Reptile, Mileena, Sektor, and Rain under his rule and finds a way to merge outworld and the netherealm. And shinnok is killed by the elder gods for breaking the rules of mortal kombat, same as shao kahn. Tanya flees and join's Quan Chi.
The last scene would have Quan Chi and Onaga(??) joining an alliance to destroy all the realms and blah blah blah. Before the scene ends, It's revealed that Quan Chi wants to have total control of the realms and plans to betray Onaga.
So in this reboot, Quan Chi would be the new Shao Kahn, just more tactical, sneaky, and devious.
Survived MK10: Scorpion, Noob, Smoke, CSZ, Havik, Johnny Cage, Kung Lao, Sonya, Baraka, Ermac, Kenshi, Kitana, Jade, Ashrah, BRC, Li Mei, Sektor, Rain, Nightwolf, Tanya, Kano, Skarlet, Mileena, Jax, Reptile, Quan Chi, and Raiden
Died in MK10: Goro, Kabal, Sheeva, Cyrax, Reiko, and Shinnok
I also think that this should be made into a Trilogy... like Halo and Gears of War...
Playable Roster. Except Goro, he's just to show that he's there.